The reference is the repository's own documents, shown as they are. When the product changes, the reference changes with it.
The plan and its rules
The plan languageThe reference of sap.qmd: every block, span and attribute of the Quarto Markdown plan.The review rulesEvery rule of the review, with what it asks, its severity, its fix and the guideline it comes from.The Method LabFor each analysis: its formula, its programs, its assumptions on blinded data, a simulation and an example.The assistant: proposals, interview, chatHow proposals, the decision interview, the chat, house rules and the inbox work, with and without an AI.
From plan to outputs
Omakase: the Sapling doctrine and the study folderThe conventions Sapling chooses for you, the study folder and the commands from protocol to dashboard.The ADaM from the SAPThe plan derives each ADaM variable once; the specification, the programs and the data follow.Customize: the template and the programmer's hooksWhere the programmer adds what the generated programs cannot say, in files the generator never writes.ADaM conformancesapling adam conform: the ADaM data sets against rules of the ADaM Implementation Guide v1.2.
Design and simulation
SAS and R
The SAS sideThe same outputs in SAS, the macro library, the ADaM data sets in SAS, and every number of R against SAS.The SAS macrosThe manual of the macro library, made from the headers of the macros.The R twin of the SAS macro libraryOne R function for each SAS macro: the same blocks, in the same order, with the same labels.The study dashboard of the SAS runA dashboard in plain HTML and JavaScript: no R, no server, no network.
Documents
Word out and inThe SAP as a Word file for review, and what comes back from Word.The learning loopPublic trials, the patterns learned from them, and a benchmark.